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This web site provides code and data files that implement the simulations performed in the following paper: > Kay, K. The risk of bias in data denoising methods: examples from neuroimaging. PLoS ONE (2022). This paper is at https://doi.org/10.1371/journal.pone.0270895. The code has several dependencies: - https://github.com/cvnlab/knkutils/ - https://github.com/cvnlab/nsdcode/ - https://github.com/bastibe/Violinplot-Matlab, DOI: 10.5281/zenodo.4559847 - https://www.mathworks.com/matlabcentral/fileexchange/8797-tools-for-nifti-and-analyze-image - https://github.com/ofgulban/segmentator - https://www.fil.ion.ucl.ac.uk/spm/ - https://fsl.fmrib.ox.ac.uk/fsl/ The scripts Figure*.m run the simulations reported in the paper. The other files are functions and data files used by these scripts.
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