Overview of material associated with manuscript
*J. van Arensbergen et al:*
**Systematic identification of human SNPs affecting regulatory element activity.**
* Publication in [Nature Genetics][15]
* [Early version of the manuscript in bioRxiv][12] (see the ['live' project page][13] on OSF for a link to the published manuscript)
* [github repos with scripts and pipeline][9]
* data files:
* [SuRE-count tables][3]
* [Annotated SNPs][4]
* [genome-wide SuRE-signal profiles][5]
* [lists of raQTLs (and matched controls)][8]
* [link to raw data in GEO][7]
* Online [SNP-SuRE data browser][10]
* [Table of external data sources][16]
[3]: https://osf.io/h3m49/
[4]: https://osf.io/pjxm4/
[5]: https://osf.io/m3ve8/
[7]: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE128325
[8]: https://osf.io/6y9td/
[9]: https://github.com/vansteensellab/SuRE-SNV-code/tree/62ca98d7dfa6caecb3af868c078129cfa75b46db
[10]: https://sure.nki.nl
[12]: https://doi.org/10.1101/460402
[13]: https://osf.io/w5bzq/wiki/home/?view
This OSF project page has a [registration][14] which reflects the state of data and code at the time the manuscript was submitted for publication.
[14]: https://osf.io/mqdk4
[15]: https://www.nature.com/articles/s41588-019-0455-2
[16]: https://osf.io/w5bzq/wiki/External%20data%20sources/