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Systematic identification of human SNPs affecting regulatory element activity: supplementary data
- Joris van Arensbergen
- Ludo Pagie
- Vincent FitzPatrick
- Marcel de Haas
- Marijke Baltissen
- Federico Comoglio
- Robin van der Weide
- Hans Teunissen
- Urmo Võsa
- Lude Franke
- Elzo de Wit
- Michiel Vermeulen
- Harmen Bussemaker
- Bas van Steensel
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Category: Project
Description: Overview of material associated with manuscript J. van Arensbergen et al: Systematic identification of human SNPs affecting regulatory element activity.
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Components
SuRE-count tables
Tabular data files with SuRE counts, for 4 SuRE libraries, 2 bio reps each
SuRE-signal profiles
Bigwig data files with SuRE signal, for 4 SuRE libraries, and transfections in K562 and in HepG2
SuRE-SNP table
Tabular data file with SuRE annotation for 5919239 SNPs
raQTL list
4 text files with lists of SNPid's of significant SNPs and matched controls, for K562 and HepG2 cell lines
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