## Links & Resources
### Slides
- Workshop slides: see the `Files` tab in this OSF repository for the PDF version of the slides
- [Hands-on](https://rfun.library.duke.edu/git/slides)
## Hands-on Prequisites & Exercises
- [Git/RStudio Hands-on Exercises](http://rfun.library.duke.edu/git/)
----------
## Reproducibility
Karl Broman: [Initial Steps Toward Reproducible Research][1]
Cetinkaya-Rundel, M. (2016): [Making your research reproducible with TIER + R + GitHub][2] [Slides].
Karl Broman: [Writing Clear Code: Tools for Reproducible Research][3] [Slides]
Data Carpentry: [Reproducible Research Version Control][4]
Kitzes, J., Turek, D., and Fatma Deniz. (Eds.). (2017) *[The Practice of Reproducible Research][5]*
Gandrud, C. (2013). *[Getting Started with Reproducible Research][6]*
Scientist & Engineers: Science 101: [The Basics of Reproducibility/Replicability][7] [Video with Brian Nosek]
Stodden, V. et al. (2016). *[Enhancing reproducibility for computational methods][8].* Science 354 (6317)
Richard Ball: [TIER Protocol OSF 3.0 Midlife Crisis Demo][9].
----------
### Git & RStudio
Duke's Co-Lab: [Introduction to Git][10]
Duke's [GitLab][11]
Jenny Bryan and the STAT 545 TAs: [Happy Git and GitHub for the useR][12]
[Got 15 Minutes][13] (Interactive tool to learn Git at the Command Line)
Codecademy: [Learn Git][14]
[1]: http://kbroman.org/steps2rr/
[2]: https://osf.io/phyau/
[3]: http://kbroman.org/Tools4RR/assets/lectures/07_clearcode.pdf
[4]: http://www.datacarpentry.org/rr-version-control/
[5]: https://www.gitbook.com/book/bids/the-practice-of-reproducible-research/details
[6]: https://www.r-bloggers.com/getting-started-with-reproducible-research-a-chapter-from-my-new-book/
[7]: https://youtu.be/lvw4HBl8Lyo
[8]: https://doi.org/10.1126/science.aah6168
[9]: https://osf.io/7g6cn/
[10]: https://extend.duke.edu/courses/course-v1:InnovationCoLab+998042043+2017/about
[11]: https://gitlab.oit.duke.edu/
[12]: http://happygitwithr.com/
[13]: https://try.github.io/levels/1/challenges/1
[14]: https://www.codecademy.com/learn/learn-git
