This repository contains the R script used to conduct this analysis, supplementary material, underlying data and STROBE cohort study reporting checklist.
*The supplementary material contains the following extended material:*
• S1. Study population information
• S2. Age-specific incidence rates of cough or fever
• S3. COVID-19 incidences for scenarios C1 to C4
• S4. Full exploration of proportion requesting test values for each scenario: C1, C3 and C4
• S5. Full exploration of scenarios C1, C3 and C4 for each proportion requesting test value: 40%, 60%, 100%
• S6. Estimated cough incidence rates in England
• S7. Estimated fever incidence in England
*This repository contains the following underlying data:*
• data1_surv_com_week.csv (Survey completion rates)
• data2_bl_exp.csv (Anonymised individual characteristics of participants)
• data3_daily.csv (Daily symptom reports)
• ONS_England_mid-2019_extracted_sex-reg-age.csv (Demographic data extracted from ONS mid-2019 estimates for England, Source: Office for National Statistics licensed under the Open Government Licence v.3.0)
• ONS_UK_mid-2019_extracted_sex-age.csv (Demographic data extracted from ONS mid-2019 estimates for the United Kingdom, Source: Office for National Statistics licensed under the Open Government Licence v.3.0)
• Virus_watch_results_adj_month_2020-12-22.csv (Virus Watch cohort study estimates for the incidence of cough or fever cases in 2020).
• VW_monthly_cough_prop.csv (Estimates of the proportion of cough or fever cases which are not COVID-19 cases from Virus Watch cohort study).