Data are from van [Arensbergen *et al.* 2017][1] and were re-mapped to genome build hg38.
Contains annotation of all enhancers used in this experiment with the following columns:
|name | description|
|--------------|------------|
|genehancer_id | identifier used by the genehancer database (v4.6) |
|seqname | sequence name of the chromosome on which the enhancer is found (hg38) |
|center | midpoint of the enhancer annotation by genehancer v4.6 (hg38) |
|class | classification of enhancer according lamina state of enhancer and classification by GROcap and SuRE*|
|log10_SuRE | log10 SuRE expression with pseudo count of 0.5 times minimum expression measured |
|log10_GROcap | log10 GROcap expression with pseudo count of 0.5 times minimum expression measured
|LRS | "lamina repression score" (LRS) is the deviation of the measured GRO-cap signal of enhancers in LADs from the average GRO-cap signal of enhancers in iLADs with a matching SuRE signal.
|\*classes | description|
|----------|-------------------------|
|iLAD | enhancer in iLAD |
|escaper | SuRE > 0, GROcap > -2 |
|repressed | SuRE > 0, GROcap < -2.8 |
|inactive | SuRE < 0, GROcap < -2.8 |
|boundary | enhancer in LAD, not falling within any of the above classifications |
[1]: http://doi.org/10.1038/nbt.3754