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Local area reproduction numbers and S-gene target failure

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Description: This repository contains the data and code for our report exploring the association between upper-tier local area (UTLA) reproduction number estimates in England and the proportion of Covid-19 tests negative/positive for the S-gene.

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Estimating the increase in reproduction number associated with the Delta variant using local area dynamics in England

Abbott, Kucharski & Funk
This repository contains the data and code for analyses exploring the association between upper-tier local area (UTLA) reproduction number estimates i...
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