The extended version of the Harvard-Oxford atlas (Desikan et al., 2006) includes the Reinforcement Learning Atlas (Pauli et al., 2018) for extended coverage of subcortical nuclei and the AAL cerebellum ROIs (Tzourio-Mazoyer et al., 2002).
The Reinforcement Learning Atlas was published by Julian Michael Tyszka, Wolfgang Pauli & Amanda Nili and can be downloaded from http://doi.org/10.17605/OSF.IO/JKZWP
The NTS masks are adapted from Priovoulos et al. (2019) by enlarging them using FSL Maths with the dilation option and a 9 x 9 x 9 kernel box. The original mask published with the paper can be downloaded from https://github.com/npriov/NTS
**References**
Desikan, R. S., Ségonne, F., Fischl, B., Quinn, B. T., Dickerson, B. C., Blacker, D., … Killiany, R. J. (2006). An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. NeuroImage, 31(3), 968–980.
Pauli, W. M., Nili, A. N. & Tyszka, J. M. (2018). A high-resolution probabilistic in vivo atlas of human subcortical brain nuclei. Sci. Data, 5:180063. DOI: http://doi.org/10.1038/sdata.2018.63
Priovoulos, N., Poser, B. A., Ivanov, D., Verhey, F. R., & Jacobs, H. I. (2019). In vivo imaging of the nucleus of the solitary tract with Magnetization Transfer at 7 Tesla. NeuroImage, 116071.
Tzourio-Mazoyer, N., Landeau, B., Papathanassiou, D., Crivello, F., Etard, O., Delcroix, N., … Joliot, M. (2002). Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. NeuroImage, 15(1), 273–289.
