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Supplement: Transcriptome assembly comparison
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Category: Data
Description: Within this project, we present a comprehensive evaluation of ten de novo assembly tools (long-standing and novel ones) across various short-read RNA-Seq data sets of different species of all kingdoms of life. We evaluated all assembly tools using various metrics and build more than 200 single k-mer assemblies. Our processed read data, all assemblies, execution commands and intermediate alignment files to reproduce our results can be found here.
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