All data and annotated analysis files are provided in compressed format. Upon unzipping, start the associated .RProject file and run individual RNotebooks (.Rmd) in the indicated sequence (e.g. 00, 01, 02).
Note that R/package updates may result in slight variations in the final output, however the results should be largely identical with those presented in the associated manuscript. If the code fails to run due to specific changes to R/associated packages, most results should still be possible to reproduce simply by loading the .RData file provided with each analysis.
Relevant experimental information is provided within the associated RNotebooks and in the accompanying manuscript.
For issues/questions, please contact Dr Ralitsa Madsen (r.madsen@ucl.ac.uk).