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DNA recombinant technology was a landmark for the development of the synthetic biology, which constitutes an intersection area between biology and engineering and should contribute to designing biological systems.The development of effective tools,which allow us to increase precision on gene regulation are essential for proper genetic manipulation. Current information has demonstrated effective control of the RNA polymerase flux using different integrases, capable to catalyse unidirectional inversion of DNA to turn on/off regulatory genes in prokaryotic cells.However, knowledge about the functionality of integrases in eukaryotic cells isstill limited. Here we show the remarkable functional capability ofbacteriophages serine integrasesin plant cells.A co-transformation plasmid system was utilized to evaluate integrases in *A. thaliana* protoplasts. The first plasmid contained the codon optimized integrase 2 gene or the integrase 5 gene sequences under inducible promoters. The second plasmid was the reporter plasmid that contains the *gfp* gene under the 35SCaMV promoter placed in reverse complement orientation and flanked by the attB and attP sites of both integrases.Once the integrases were expressed, it would flip the promoter sequence toits correct orientation and promotingGFP expression.The results proved that the promoter was flipped leading to the RNA polymerase flux through the DNA molecule and the GFP expression, which was detected by fluorescent microscopy.The promoter inversion was detected by PCR and sequencing analyses. We anticipate our results to be an initial point for development of more complex models of gene regulation in plants using integrases.
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