OSHy-X Atlas

doi:10.17605/OSF.IO/ZGE9T

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Open Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T

OSHy-X is an atlas repository and containerised Python script (https://github.com/Cadaei-Yuvxvs/OSHy-X) that automatically segments the hypothalamus and fornix at 3T and 7T in both T1w and T2w scans.

If you intend to use OSHy-X, please cite this abstract: TBA

The user inputs a T1w or T2w image. They are given the options for denoising, B1 bias field correction and image cropping. After Joint Label Fusion, the given output are the label, volume and mosaic files.

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