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The main content of each folder is briefly demonstrated here. 1. QC--quality control of raw data; 2. Mapping--alignment of reference sequences and the distribution of reads on known gene types; 3. SNP_InDel--analysis of single nucleotide polymorphisms (SNP) and insertion-deletion (InDel); 4. Alternative_Splicing--alternative splicing analysis; 5. Assembly--assembly of transcripts; 6. lncRNA_Filter--filter of lncRNAs and mRNAs; 7. Qualification--display of quantitative results and expression correlation between samples; 8. DE_Analysis--main data of differentially expression lncRNAs and mRNAs; 9. lncRNA-Targets--target genes of lncRNAs in cis and trans; 10. GO_Enrichment--Gene Ontology enrichment analysis of target genes; 11. KEGG_Enrichment--kyoto encyclopedia of genes and genomes (KEGG) analysis of target genes.
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