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Accurate and versatile 3D segmentation of plant tissues at cellular resolution: Core Datasets

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Description: Datasets used training and validation of the PlantSeg pipeline

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Repository containing 2 core datasets of fixed and live plant organs imaged with confocal and light sheet microscopes together with ground truth cell instance segmentation. For more information about the data acquisition, ground truth creation, please refer to https://www.biorxiv.org/content/10.1101/2020.01.17.910562v1

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  1. LateralRootPrimordia - l…

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Components

LateralRootPrimordia

Wolny
Lateral Root Primordia of Arabidopsis thaliana
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Ovules

Wolny
Ovules of Arabidopsis thaliana
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InflorescenceMeristem

Wolny
Inflorescence meristems of Arabidopsis thaliana wild type and the bce mutant
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CLSMLeaf

Wolny
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deep-learningsegmentation

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