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Autophagic body segmentation with Cellpose

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Date created: 2023-10-10 03:06 PM | Last Updated: 2024-05-27 05:21 PM

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Description: Code and data used for training a Cellpose 2.0 model to automatically segment autophagic bodies in the yeast vacuole in TEM images

License: CC-By Attribution 4.0 International

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This is data to support the publication:

Emily C. Marron, Jonathan Backues, Andrew M. Ross and Steven K. Backues (2024) Accurate automated segmentation of autophagic bodies in yeast vacuoles using cellpose 2.0 Autophagy https://doi.org/10.1080/15548627.2024.2353458

Author's accepted manuscript: https://osf.io/g9xky

This includes:

  • Original images used for training the Cellpose model, and their gr…

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Citation

Components

Cellpose 2.0 model for APB segmentation

Backues, Ross & Marron
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