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This repository houses codes and sample data for reproducing figures in the following manuscript: Takemura, H., Ogawa, S., Mezer, A., Horiguchi, H., Miyazaki, A., Matsumoto, K., Shikishima, K., Nakano, T. & Masuda, Y. (2019) Diffusivity and quantitative T1 profile of human visual white matter tracts after retinal ganglion cell damage. NeuroImage: Clinical, 23: 101826. https://doi.org/10.1016/j.nicl.2019.101826 For running this analysis, users require - MATLAB - vistasoft https://github.com/vistalab/vistasoft - MBA (by Franco Pestilli, Indiana University) https://github.com/brain-life/mba - AFQ (by Jason Yeatman, University of Washington) https://github.com/yeatmanlab/AFQ Corresponding author of this repository: Hiromasa Takemura (htakemur@nict.go.jp) Center for Information and Neural Networks (CiNet), National Institute of Information and Communications Technology
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