Main content

Home

Menu

Loading wiki pages...

View
Wiki Version:
These are data for for Bein et al., 2020, NatComms (accepted): *Mnemonic prediciton errors bias hippocampal states* #### read here for explanation about the data Relevant code is abvailable on: https://github.com/odedbein/Ticky_public * This is a reanalysis of data previously published in Duncan et al., 2012, Hippocampus: *Evidence for Area CA1 as a Match/Mismatch Detector: A High-Resolution fMRI Study of the Human Hippocampus".* * In the ms, s020 was removed from analysis due to entorhinal dropout. I uploaded their data, because no reason not to use if analyzing other ROIs. * LSS models are the models of the single-trials, in line with Mumford et al. 2014, NI. ## Explanation about the data: #### In each subject folder you'll find: 1. data: the raw epi scans files, mtc means motion corrected, slice timing corrected, and that the first 5 volumes collected were removed. ps: percent signal change. all runs are already aligned. 2. single_trial_Tmaps: I used single trials t-stats for the analysis. If you want to use these - they are in this folder. No need to run the LSS models again :) each trial had a cue part and an image part. tstat_cue is for the cue part, tstat_Im is for the image part. these are not divided by runs, they are numbered by the number of trial in the experiment 3. mprage folder: this has the mprage T1-weighted anatomical scan of each participant 4. regressors: these are the regressors I used to run the LSS models. Use them if you want to run the LSS models yourself. 5. ROIs: all rois are already in the epi's space. The hip15... file includes all hipp subfields: R hipp: 1 is CA1, 3 is CA2/3/dentate, 2 is subiculum. L hipp: 4 is CA1, 6 is CA2/3/dentate, 5 is subiculum. The entorhinal files: I masked the entorhinal with the epi to only look at voxels that have BOLD signal. I put here both the files before and after masking. 6. behavior: this is the behavioral file of each participant. see my paper and KD 2012 paper for task description. subject reposnese: 8 – match 9 – mismatch in the column that has e.g., R1I2 R-room, I-item, the number next to them is how many changes there were to the layout (room), or to the furniture (item). R1I2 means that there was 1 change to the layout (swap of furniture) and 2 changes to items identity (items themselves were replaced with other items).
OSF does not support the use of Internet Explorer. For optimal performance, please switch to another browser.
Accept
This website relies on cookies to help provide a better user experience. By clicking Accept or continuing to use the site, you agree. For more information, see our Privacy Policy and information on cookie use.
Accept
×

Start managing your projects on the OSF today.

Free and easy to use, the Open Science Framework supports the entire research lifecycle: planning, execution, reporting, archiving, and discovery.