Main content

Home

Menu

Loading wiki pages...

View
Wiki Version:
BrainHack Global 2021 We are excited to see you at this collab 🎉 Hackathon description --------------------- **Title**: ARTEM-IS BrainHack Global 2021: web-app and terminology lexicon **Project leads:** Anđela Šoškić, Twitter handle: @angelasoskic Mattermost handle: @asoskic Remi Gau, Twitter handle: @RemiGau Mattermost handle: @RemiGau **Timezone**: +8 (SGT) +1 (CET) **Description**: In the EEG 'Garden of Forking Paths,' most research reports do not have enough detail to know which path has been taken, hampering reproducibility, replication and meta-science (Šoškić et al., 2021). ARTEM-IS is an INCF initiative (https://www.incf.org/sig/incf-working-group-artem) to create community-developed, Agreed Reporting Templates that are designed to make reporting EEG methodology easier and FAIR-compliant (findability, accessibility, interoperability, and reusability: https://www.go-fair.org/fair-principles/), by asking you all the right questions about EEG methodological details and allowing you to download your responses as a supplement to your publication or preregistration (ARTEM-IS https://doi.org/10.17605/OSF.IO/PDX6Y). ARTEM-IS ensures that all the right questions are asked by following ARTEM-IS Design Guidelines, which draw from the experience of other industries that implement checklists and templates, such as surgery or aviation, as well as by utilizing knowledge of typical reporting errors obtained by systematic reviews of existing publications (Styles, et al., 2021: https://doi.org/10.1016/j.neuroimage.2021.118721). As the first ARTEM-IS Template, we are currently developing a reporting tool for ERP methods, in the form of a web-app based on eCOBIDAS model (https://github.com/Remi-Gau/eCobidas). We already have a working demo of this app, and you can try it here: https://www.repronim.org/reproschema-ui/#/?url=https%3A%2F%2Fraw.githubusercontent.com%2FRemi-Gau%2FeCobidas%2Fhack_artemis_202110%2Fschemas%2Fartemis%2Fprotocols%2Fartemis_schema.jsonld Join us in the Hack to make the tools we need! **Goals for this hackathon:** For this hackathon, we will be working on two fronts. First goal is to fix some of the existing bugs in the web-app template (list of issues: https://github.com/Remi-Gau/artemis_checklist/issues). We will also be working on creating the body of terms for the future EEG terminology lexicon of terms present in ARTEM-IS Templates (currently ARTEM-IS Template for ERP). This lexicon will eventually accompany templates as part of help and documentation. During this hackathon, we will work on: (1) identifying terms that are present in the current ARTEM-IS template, and not on the list of terms that will be included in the ARTEM-IS lexicon; (2) identifying terms that exist in the following lexicons of terminology: NIDM communities (i.e. NIDM Terms, NIDM Concepts, BIDS Specification, CONP DATS, Neurobridge), InterLex and COBIDAS; (3) adding proposals for definitions for terms that are not defined. **Skills we need:** For the goal of fixing bugs, basic spreadsheet experience, as well as programming skills (in particular javascript and Vue.js) are both welcome! More experienced coders can take part in debugging, but newbies to programming can also be very helpful with troubleshooting. Experience conducting EEG or describing EEG methods would be a bonus, but not necessary to participate. To work on the lexicon, knowledge about EEG methodology and terminology will be essential, but no programming skills at all are expected. **Newcomers to ARTEM-IS are welcome!** **What will participants learn?** Participants will be part of an open science collaborative project. They will become familiar with electrophysiology and different resources and initiatives to standardize and report neuroimaging data and analysis methodology. Particularly, they will get insights into the metascience of EEG, and improve their understanding of EEG methodology, and best practice in documenting and reporting it. Participants who will take part in the app improvement, either by helping programmers troubleshoot issues or by working on these issues themselves, will get an opportunity to practice programming skills and exchange knowledge with others. Participants will also have an opportunity to work on an example of Reproschema standardized form generation schema (A standardized form generation and data collection schema). Participants who work on the EEG terminology lexicon will get an opportunity to work on the development of a lexicon of EEG terms, as well as to get insights into existing lexicons of neuroscience terminology and the process of building a new lexicon and integrating it into the community of other lexicons. Links: ------ **More info:** BrainHack Global OSF page: https://osf.io/nrh2k/ Link to project on the BrainHack Global page: https://brainhack.org/global2021/project/project_153/ Onboarding overview for newcomers: [GOOGLE DOC][1] **Communication channels during hackathon:** Mattermost: https://mattermost.brainhack.org/brainhack/channels/artem-is ARTEM-IS Gathertown Clubroom: https://gather.town/app/Bw3fcD2KiO11izhe/artemisclubroom (Password on Mattermost) - daily check in in the Clubroom: 8 AM CET (3 PM SGT, 6 PM AEDT) Contributor acknowledgement --------------------------- Contributors in the OHBM BrainHack will be acknowledged on a contributors page in the ARTEM-IS OSF Project and as contributors of the project's OSF component for BrainHack Global 2021. [1]: https://docs.google.com/document/d/1iroDLlkIDLMbxjfYn9D6VrkNvOwzurszBATdQZ251os/edit?usp=sharing
OSF does not support the use of Internet Explorer. For optimal performance, please switch to another browser.
Accept
This website relies on cookies to help provide a better user experience. By clicking Accept or continuing to use the site, you agree. For more information, see our Privacy Policy and information on cookie use.
Accept
×

Start managing your projects on the OSF today.

Free and easy to use, the Open Science Framework supports the entire research lifecycle: planning, execution, reporting, archiving, and discovery.