Circuits with broken fibration symmetries perform core logic computations in biological networks. Ian Leifer, Flaviano Morone, Saulo D. S. Reis, José S. Andrade Jr., Mariano Sigman, Hernán A. Makse
https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007776
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Legend for the data:
"Regulations_in_ATRM" - "Arabidopsis Thaliana"
"regulations_bacilus_cleaned" - "Bacillus subtilis"
"Micobacterium_tuberculosis" - "Micobacterium tuberculosis"
"salmonella_Typhi_SL1344_RN" - "Salmonella SL1344"
"SGD_full_yeast_TF-G" - "Yeast SGD"
"YTRP_TF_gene_regulatory" - "Yeast YTRP regulatory"
"YTRP_TF_gene_binding" - "Yeast YTRP binding"
"trrust_rawdata.mouse" - "Mouse TRRUST"
"trrust_rawdata.human" - "Human TRRUST2"
"human_network_tf_gene_weighted" - "Human TRRUST"
"combinedKEGG" - "Human KEGG"