The data.zip file contains three directories as follows:
.
├── example_images
├── masks
└── Track_IDs
The `example_images` folder contains raw TIF images of Ch1 (fluorescence signal of E.coli) and Ch2 (bright field image of Myxococcus xanthus and E. coli).
Due to size limitations, only the 10 first frames for ROI number 9 are provided in this dataset. These, however, can be used to apply bacto_tracker to segment masks of E. coli and M. xanthus, as well as for building trajectories.
The `masks` folder contains the masks of M. xanthus extracted for each frame and each ROI of the full experiment. Please refer to Underlying Table 2 for more information.
The `Track_IDs` folder contains the tracks extracted for the full experiment. Please refer to Underlying Table 2 for more information.
Finally, `track_TXY.csv` contains the result of applying `create_csv_tracks.py`. This file contains the full list of tracks extracted from this experiment.
