Main content

A Bacteria Segmentation/Tracking Tool based on Machine Learning

  2
Contributors:
  3. Courtney C. Cameron

Date created: | Last Updated:

: DOI | ARK

Creating DOI. Please wait...

Create DOI

Category: Project

Description: Dataset and tools for the segmentation and tracking of growing bacterial cell populations

License: CC0 1.0 Universal

Wiki

Add important information, links, or images here to describe your project.

Files

Files can now be accessed and managed under the Files tab.

Citation

Components

Complete Dataset

Buceta, Deter, Dies & 2 more
Complete dataset of microscopy images (phase contrast + fluorescence)
Recent Activity

Reduced Dataset

Buceta, Deter, Dies & 2 more
Sub dataset obtained from the complete dataset of microscopy images
Recent Activity

Videos

Buceta, Deter, Dies & 2 more
Supplementary videos showing the result of a segmentation/tracking process This channel also provides demo videos to further explain the usage of thes...
Recent Activity

Supplementary Software

Buceta, Deter, Dies & 2 more
Python and FiJi scripts V1.0 (the linked GitHub repository contains the latest available version of these scripts); Supplementary Software
Recent Activity

Tags

Recent Activity

OSF does not support the use of Internet Explorer. For optimal performance, please switch to another browser.
Accept
This website relies on cookies to help provide a better user experience. By clicking Accept or continuing to use the site, you agree. For more information, see our Privacy Policy and information on cookie use.
Accept
×

Start managing your projects on the OSF today.

Free and easy to use, the Open Science Framework supports the entire research lifecycle: planning, execution, reporting, archiving, and discovery.

Copyright © 2011-2025 Center for Open Science | Terms of Use | Privacy Policy | Status | API
TOP Guidelines | Reproducibility Project: Psychology | Reproducibility Project: Cancer Biology