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CIRCADA: Circadian apps for data analysis

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Description: The three Shiny apps CIRCADA-I, CIRCADA-E, and CIRCADA-S support exploration of circadian data, enabling visualization and analysis of circadian parameters like period and phase.

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The Shiny app CIRCADA-I enables interactive data analysis and supports a variety of csv data file formats (including ClockLab and LumiCycle). The app provides some initial data processing, such as detrending and binning, then applies methods for estimation of period, phase, amplitude, significance of rhythmicity, and extraction of circadian components: fitting to sine and frequency modulated Möbiu…

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Bayesian spectral analysisCircadian rhythmsDiscrete wavelet transformfrequency modulated Möbius model-fittingLomb-ScarglePeriodogramShiny appSignificance of rhythmsSine-fittingSingular spectrum analysis

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