Home

Menu

Loading wiki pages...

View
Wiki Version:
<ul> <li> <p><strong>Project title</strong>: Sustaining attention for a prolonged period of time increases temporal variability in cortical responses</p> </li> <li> <p><strong>Project ID</strong>: MFBrain (Mental Fatigue in the Brain)</p> </li> <li><strong>Authors</strong>: Reteig, L.C., van den Brink, R.L., Prinssen, S., Cohen, M.X., & Slagter, H.A.</li> <li><strong>Affiliation</strong>: Department of Psychology, University of Amsterdam</li> <li><strong>Year</strong>: 2018</li> <li><strong>Preprint</strong>: <a href="https://doi.org/10.1101/501544" rel="nofollow">bioRxiv</a></li> <li><strong>Published version</strong>: Reteig, L. C., van den Brink, R. L., Prinssen, S., Cohen, M. X., & Slagter, H. A. (2019). Sustaining attention for a prolonged period of time increases temporal variability in cortical responses. <em>Cortex</em>. <a href="https://doi.org/10.1016/j.cortex.2019.02.016" rel="nofollow">https://doi.org/10.1016/j.cortex.2019.02.016</a></li> </ul> <h1>Project layout</h1> <h2>File descriptions</h2> <ul> <li><code>MFBrain.Rproj</code>: Config file with options for the R project; also determines that this the top-level folder.</li> </ul> <h2>Folder descriptions</h2> <p>See the <code>README</code> inside each folder for more information.</p> <ul> <li><code>/data</code>: behavioral and EEG data</li> <li><code>/materials</code>: code for the experimental task</li> <li><code>/src</code>: data analysis code</li> </ul> <h2>Directory structure</h2> <p>After downloading everything, your directory structure should look like this:</p> <pre class="highlight"><code>MFBrain │ MFBrain.Rproj └───data └───materials └───src</code></pre> <h1>Reproducing the analyses</h1> <p>Three different ways to reproduce the analyses:</p> <ul> <li> <p><strong>To reproduce all the statistical results in the paper</strong>: Open the <code>src/MFBrain.Rmd</code> notebook in <a href="https://www.rstudio.com/" rel="nofollow">RStudio</a> and run it. Alternatively, open the <code>src/MFBrain.nb.html</code> file to see the results without having to run the code. The notebook starts from the raw behavioral data, but not from the raw EEG data: it uses text files in <code>data/EEG/statistics</code> that were written out from MATLAB.</p> </li> <li> <p><strong>To reproduce the figures in the paper</strong>: Run the <code>/src/MFBrain_master_reproduce.m</code> script in MATLAB, which loads the provided group EEG data and statistics text files.</p> </li> <li> <p><strong>To recompute the ERP and EEG time-frequency measures</strong>: Run the <code>/src/MFBrain_master_recompute.m</code> script in MATLAB, which loads the preprocessed EEG data.</p> </li> </ul> <p>Note that unfortunately we cannot provide a way to reproduce the preprocessed data from the raw data as the preprocessing for this project was not fully scripted out.</p>
OSF does not support the use of Internet Explorer. For optimal performance, please switch to another browser.
Accept
This website relies on cookies to help provide a better user experience. By clicking Accept or continuing to use the site, you agree. For more information, see our Privacy Policy and information on cookie use.
Accept
×

Start managing your projects on the OSF today.

Free and easy to use, the Open Science Framework supports the entire research lifecycle: planning, execution, reporting, archiving, and discovery.