### Overview This repository includes datasets and scripts required to conduct all of the analyses for the article entitled: _Measuring changes in transmission of neglected tropical diseases, malaria, and enteric pathogens from quantitative antibody levels_ Published in _PLoS Neglected Tropical Diseases_ in 2017: [http://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0005616][1] The data and script directories are organized in parallel by datasource (enterics, garki, mauke). Each dataset is in comma delimited format (.csv) and has an associated codebook (.txt) that describes each dataset's content. For people familiar with the R statistical software, an easier way to access the data is to download the `tmleAb` package, which includes all of the data! ### Software and Vignette We have developed a convenient software package in R called `tmleAb` that can be installed from [http://www.github.com/ben-arnold/tmleAb][2] using the devtools package. Please see the package's [web page][3] for an introductory vignette, which includes installation instructions and examples of how to use its key features. The `tmleAb` package also includes all of the datasets included in this project repo. ### Additional Information Should you have any questions about the materials in this project, please contact Ben Arnold at UC Berkeley (benarnold@berkeley.edu). [1]: http://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0005616 [2]: http://www.github.com/ben-arnold/tmleAb [3]: http://ben-arnold.github.io/tmleAb