The **script_EEG_source_estimation** component contains an SPM 12 based workflow (contains job file and invoking file for each step) for source localising SSVEP data, as well as R-markdown scripts to analyse and plot beta-weights of ANOVA-RM results:
- **SPM_01_Epoch_forSPM.m** script to filter and average preprocessed EEG data for conversion to SPM data format
- **SPM_02_conv_preprocess.m** and **SPM_02_conv_preprocess_job.m** conversion of eeglab file structure to SPM
- **SPM_03_sourceconstruction.m** and **SPM_03_sourceconstruction_job.m** source reconstruction workflow based on SPM's multiple sparse priors algorithm and group inversion for all subjects
- **SPM_04_source_images.m** and **SPM_04_source_images_job.m** creation of probabilistic .nifti files containing source power estimates in each voxel for each subject, frequency and condition
- **SPM_05a_anova_6Hz_EMOTION_X_PICTURE.m** and **SPM_05a_anova_6Hz_EMOTION_X_PICTURE_job.m** ANOVA-RM model specification for analysis of 6 Hz SSVEP sources with factor EMOTION and PICTURE
- **SPM_05b_anova_2Hz_EMOTION_noirreg_noscr.m** and **SPM_05b_anova_2Hz_EMOTION_noirreg_noscr_job.m** ANOVA-RM model specification for analysis of 2 Hz SSVEP sources with factor EMOTION
- **SPM_06a_contrManager_anova_EMOTION_X_PICTURE_job.m** definition of contrasts of interest for analysis and visualisation of 6 Hz-ANOVA-RM model
- **SPM_06b_contrManager_anova_EMOTION_noirreg_noscr_job.m** definition of contrasts of interest for analysis and visualisation of 2 Hz-ANOVA-RM model
- **SPM_07a_analyze_beta_weights_6Hz.m** extraction and export of beta values from 6 Hz-ANOVA-RM based mask
- **SPM_07b_analyze_beta_weights_2Hz.m** extraction and export of beta values from 2 Hz-ANOVA-RM based mask
- **SPM_ANOVA_beta_analysis_2Hz.Rmd** R-based analysis and plotting of beta weights extracted from 2 Hz ANOVA-RM model
- **SPM_ANOVA_beta_analysis_6Hz.Rmd** R-based analysis and plotting of beta weights extracted from 6 Hz ANOVA-RM model
- **summarySE.R** auxillary R-function
