Main content

Home

Menu

Loading wiki pages...

View
Wiki Version:
This [script](https://osf.io/mgnzc) checks that rates for valid reactions in a Webnucleo network file lie within an appropriate range for a set of temperatures. To use, first download the file by typing **curl -o check_rates.py -J -L https://osf.io/mgnzc/download** Use the script on a Webnucleo network XML file (in this example, called *net.xml*). This will be an output from a Webnucleo network calculation, but, to obtain an [example](https://osf.io/kjnct/), type **curl -o net.xml -J -L https://osf.io/kyhbs/download** Then print forward or reverse rates less than the default low value 0 or greater than the default high value 1e20 for 20 logarithmically spaced temperatures between t9 = 0.01 and 10: **python check_rates.py net.xml** Change the printout by changing script options. To view those options, type **python check_rates.py -h** For example, to check only the forward rates for 5 logarithmically spaced temperatures between t9=5 and t9=10, type **python check_rates.py net.xml --t9_low 5 --t9_pts 5 --forward_only True**
OSF does not support the use of Internet Explorer. For optimal performance, please switch to another browser.
Accept
This website relies on cookies to help provide a better user experience. By clicking Accept or continuing to use the site, you agree. For more information, see our Privacy Policy and information on cookie use.
Accept
×

Start managing your projects on the OSF today.

Free and easy to use, the Open Science Framework supports the entire research lifecycle: planning, execution, reporting, archiving, and discovery.