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**Demographic model selection with DADI** Here we provide the input files and instructions for running the demographic modeling pipeline developed by Portik et al. (2017). For this project, new models were written and incorporated into the pipeline. The scripts for running it are available using the github links for the 2D pipeline in the files section, or they can be accessed [here][1]. [1]: Within each population comparison, the input SNPs file is provided. This is all that is needed to run the dadi pipeline, but we also include the edited script and outputs for each optimization round that we ran for this project. For instructions on how to actually run the pipeline please refer to the updated information provided at [the github project page][1]. [1]:
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