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To install the package, first install the dependencies (tested in R 3.2.2 on Ubuntu 14.04.3 LTS). From the R prompt: > source("http://bioconductor.org/biocLite.R") > biocLite(c("car", "ridge", "preprocessCore", "genefilter", "sva")) Then, to install the package navigate to the directory where you have downloaded the file and run from the (linux) command shell: > wget -O pRRophetic_0.5.tar.gz https://osf.io/dwzce/?action=download > R CMD INSTALL pRRophetic_0.5.tar.gz This version of the package has been tested in R 3.2.2 on Ubuntu 14.04.3 LTS.
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