Main content

Home

Menu

Loading wiki pages...

View
Wiki Version:
Readme Kato, S., Kaplan, H. S., Schrödel, T., Skora, S., Lindsay, T. H., Yemini, E., et al. (2015). Global Brain Dynamics Embed the Motor Command Sequence of Caenorhabditis elegans. Cell, 163(3), 656–669. http://doi.org/10.1016/j.cell.2015.09.034 traces_raw= neural activity traces uncorrected traces = neural activity traces corrected for bleaching tracesDif = derivative of traces IDs = identified neuron IDs timeVectorSeconds = time vector in seconds fps = frames per second dataset = name of dataset stimulus -identity = what was changed e.g. O2 (oxygen) -type = stimulus type e.g. binary steps -switchtimes = time in seconds when stimulus changed from initial state to the other state -initialstate = the state that the stimulus starts with, refers to "conc" -conc = the concentrations of the stimulus -concunits - units of the "conc" States = vector of different state types (8 states for WT_NoStim, 4 states for WT_Stim and AVA_HisCl 8 states for WT_NoStim: ‘FWD’ forward crawling ‘SLOW’ forward slowing ‘DT’ dorsal post reversal turn ‘VT’ ventral post reversal turn ‘REV1’ reverse crawling ‘REV2’ reverse crawling ‘REVSUS’ sustained reverse crawling ‘NOSTATE’ - ambiguous 4 states for WT_Stim and AVA_HisCl: ‘FWD’ forward crawling ‘REV’ reverse crawling ‘REVSUS’ sustained reverse crawling ‘TURN’ post reversal turn
OSF does not support the use of Internet Explorer. For optimal performance, please switch to another browser.
Accept
This website relies on cookies to help provide a better user experience. By clicking Accept or continuing to use the site, you agree. For more information, see our Privacy Policy and information on cookie use.
Accept
×

Start managing your projects on the OSF today.

Free and easy to use, the Open Science Framework supports the entire research lifecycle: planning, execution, reporting, archiving, and discovery.